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DTSTART;TZID=America/Denver:20231113T095000
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UID:submissions.supercomputing.org_SC23_sess452_ws_isav108@linklings.com
SUMMARY:Enabling In Situ Visualization of Large-Scale Cellular Simulations
DESCRIPTION:Ayman Yousef and Amanda Randles (Duke University)\n\nThe signi
 ficance of studying cellular systems in silico is underscored by persisten
 t innovation in computational models. These models can now capture hundred
 s of millions of cells to recapitulate physiological behavior. The growing
  scale of models, however, poses challenges not only for visualization and
  analysis of the data but also for the process of simulation maintenance. 
 Without proper, flexible analysis routines in place, the deployment of the
 se models continues to lag. This paper presents an approach to enable in s
 itu visualization and analysis of large-scale fluid-structure-interaction 
 models for real-time data interrogation and visualization on leadership cl
 ass systems in preparation for increasing scale. We demonstrate the feasib
 ility and explore the flexibility of this pipeline on a complex cell model
  with millions of components running on the Summit supercomputer.\n\nTag: 
 Data Analysis, Visualization, and Storage, Large Scale Systems, Performanc
 e Measurement, Modeling, and Tools\n\nRegistration Category: Workshop Reg 
 Pass\n\nSession Chairs: E. Wes Bethel (San Francisco State University, Law
 rence Berkeley National Laboratory (LBNL)); Nicola Ferrier (Argonne Nation
 al Laboratory (ANL), University of Chicago); Axel Huebl (Lawrence Berkeley
  National Laboratory (LBNL)); Tom Vierjahn (Westphalian University of Appl
 ied Sciences); and Sean Ziegeler (US Department of Defense HPC Modernizati
 on Program, Department of Defense High Performance Computing Modernization
  Program (DoD HPCMP))\n\n
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